Tingshuang Yi
Editors, Plant Diversity
Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
Area of expertise: Plant phylogeny, plant phylogenomics, plant diversification
Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
Area of expertise: Plant phylogeny, plant phylogenomics, plant diversification
Title: Professor
Email: tingshuangyi@mail.kib.ac.cn
Web-link of Research Group: http://groups.kib.cas.cn/gbows/yts/
Selected publications:
Li Yunxia, Qin, Xiaogang, Fabien L., Tingshuang*, Onstein Renske E.. 2025. Accelerated Speciation in Temperate Cannabaceae: The Role of Pre-Adaptation, Ecological Opportunities and Niche Divergence. Global Ecology and Biogeography 34: e70183.
Zhang Rong, Stull Gregory W., Jin Jian-Jun, Wang Yin-Huan, Guo Ying, Yang Zhi-Yun, Li Hong-Tao, An Kai-Lun, Charboneau Joseph L. M., Folk Ryan A., Cardoso Domingos, de Queiroz Luciano P., Bruneau Anne, Soltis Pamela S., Soltis Douglas E., Smith Stephen A., Li De-Zhu*, Yi Ting-Shuang*, 2025. Phylogenetic Resolution and Conflict in the Species-Rich Flowering Plant Family Leguminosae. Systematic Biology .
Yang Ying‐Ying #, Stull Gregory W.#, Qu Xiao‐Jian, Deng Min, Zhao Lei, Hu Yi, Wang Zhi‐Heng, Ma Hong, Li De‐Zhu *, Smith Stephen A.*, Yi Ting‐Shuang*, 2025. Genome duplications, genomic conflict, and rapid phenotypic evolution characterize the Cretaceous radiation of Fagales. Journal of Integrative Plant Biology 67: 2929–2944.
Liu Shui-Yin, Yang Yingying, Tian Qin, Yang Zhi-yun, Li Shu-feng, Valdes Paul J., Farnsworth Alex, Kates Heather R., Siniscalchi Carolina M., Guralnick Robert P., Soltis Douglas E., Pamela Soltis S., Gregory Stull W.*, Ryan Folk A.*, Yi Ting-Shuang*, 2024. An integrative framework reveals widespread gene flow during the early radiation of oaks and relatives in Quercoideae (Fagaceae). Journal of Integrative Plant Biology 67: 1119–1141.
Tian Qin, Stull Gregory W., Kellermann Jürgen, Medan Diego, Nge Francis J., Liu Shui-Yin, Kates Heather R., Soltis Douglas E., Soltis Pamela S., Guralnick Robert P., Folk Ryan A., Onstein Renske E.*, Yi Ting-Shuang*, 2024. Rapid in-situ diversification rates in Rhamnaceae explain the parallel evolution of high diversity in temperate biomes from global to local scales. New Phytologist 241: 1851–1865.
Stull Gregory W. #, Qu Xiao-Jian#, Parins-Fukuchi Caroline, Yang Ying-Ying, Yang Jun-Bo, Yang Zhi-Yun, Hu Yi, Ma Hong, Soltis Pamela S., Soltis Douglas E., Li De-Zhu*, Smith Stephen A.*, Yi Ting-Shuang*, 2021. Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms. Nature Plants 7, 1015–1025.
Zhao Yiyong, Zhang Rong, Jiang Kai-Wen, Qi Ji, Hu Yi, Guo Jing, Zhu Renbin, Zhang Taikui, Egan N. Ashley, Yi Ting-Shuang*, Huang Chien-Hsun*, Ma Hong*, 2021. Nuclear phylotranscriptomics and phylogenomics support numerous polyploidization events and hypotheses for the evolution of rhizobial nitrogen-fixing symbiosis in Fabaceae. Molecular Plant 14: 748–773.
Jin Jian-Jun#, Yu Wei-Bin#, Yang Jun-Bo, Song Yu, dePamphilis Claude W., Yi Ting-Shuang*, Li De-Zhu*, 2020. GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes. Genome Biology 21:241.
Zhang Rong#, Wang Yin-Huan#, Jin Jian-Jun#, Stull Gregory W., Bruneau Anne, Cardoso Domingos, de Queiroz Luciano Paganucci, Moore Michael J., Zhang Shu-Dong, Chen Si-Yun, Wang Jian, Li De-Zhu*, Yi Ting-Shuang*, 2020. Exploration of plastid phylogenomic conflict yields new insights into the deep relationships of Leguminosae. Systematic Biology 69:613–622.
Li Hong-Tao#, Yi Ting-Shuang#, Gao Lian-Ming#, Ma Peng-Fei#, Zhang Ting#, Yang Jun-Bo#, Gitzendanner Matthew A#, Fritsch Peter W., Cai Jie, Luo Yang, Wang Hong, van der Bank Michelle, Zhang Shu-Dong, Wang Qing-Feng, Wang Jian, Zhang Zhi-Rong, Fu Chao-Nan, Yang Jing, Hollingsworth Peter M., Chase Mark W., Soltis Douglas E., Soltis Pamela S.*, Li De-Zhu*, 2019. Origin of angiosperms and the puzzle of the Jurassic gap. Nature Plants 5: 461–470.
Qu Xiao-Jian, Moore Michael J., Li De-Zhu*, Yi Ting-Shuang*, 2019. PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes. Plant Methods 15: 50.
Zhang Shu-Dong#, Jin Jian-Jun#, Chen Si-Yun, Chase Mark W., Soltis Douglas E., Li Hong-Tao, Yang Jun-Bo, Li De-Zhu*, Yi Ting-Shuang*, 2017. Diversification of Rosaceae since the Late Cretaceous based on plastid phylogenomics. New Phytologist 214: 1355–1367.